Touhou no Meikyuu: Gensokyo to Tennuki no Daiju, or also known as Touhou no Meikyuu 2, is a dungeon crawler role-playing game and the sequel to the first Touhou no Meikyuu. Similar to its predecessor, Touhou no Meikyuu 2 challenges players with exploring and mapping an hug edungeon. The game uses a team of 4 characters and 8 reserve characters, and combat is be entirely turn-based. New features are available upon game completion are: Boss Rush Mode, available after recruiting 46 characters; And Enhanced Boss Rush Mode, unlocked after finishing Boss Rush Mode; Extra Areas - can be accessed from the 12th floor- with more enemies, treasure, and bosses.

Suddenly, a mysterious giant tree appears in the middle of Gensokyo disrupting the balance with the outside world. Even worse, Ame-no-Murakumo, the legendary sword has been taken from Rinnosuke, and is most likely hiding in the magical tree.